Information for 12-ATSAAGWKSTCTWGSK (Motif 24)

C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
Reverse Opposite:
G T A C A T C G A G T C C G A T C G T A A T C G C G T A A T C G G T C A C G T A G T A C A C G T A C G T A T G C C G T A A C G T
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.819
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.5 +/- 15.5bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATSAAGWKSTCTWGSK
--TAAGGCGTCTTG--
 C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
A C G T A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATSAAGWKSTCTWGSK
NTCAAGTGG-------
 C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATSAAGWKSTCTWGSK
NTCAAGTGGN------
 C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----ATSAAGWKSTCTWGSK
NANTTTCAAGTGGTTAN---
 A C G T A C G T A C G T A C G T C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATSAAGWKSTCTWGSK
-TTGAGTGSTT-----
 C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATSAAGWKSTCTWGSK
CNTTAAGTACTTAANG-
 A C G T C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATSAAGWKSTCTWGSK
AATTTCAAGTGGCTTN---
 A C G T A C G T A C G T C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATSAAGWKSTCTWGSK
BTBRAGTGSN------
 C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATSAAGWKSTCTWGSK
CTYRAGTGSY------
 C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--ATSAAGWKSTCTWGSK
NATTTAAGTACTTNAAA-
 A C G T A C G T C G T A A C G T A T C G C G T A C G T A A C T G C G A T C A G T A T G C A C G T A T G C A C G T C G T A A C T G T A C G A C T G
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T