Information for 3-AGAAGCCCTGTGAATG (Motif 4)

C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G
Reverse Opposite:
T A G C G C T A A G C T C A G T A G T C C G T A G T A C C G T A C A T G C T A G A C T G G A T C A G C T A C G T A G T C A C G T
p-value:1e-16
log p-value:-3.795e+01
Information Content per bp:1.717
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.3 +/- 20.0bp
Average Position of motif in Background48.2 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AGAAGCCCTGTGAATG
------CCTTTGAWGT
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.49
Offset:7
Orientation:forward strand
Alignment:AGAAGCCCTGTGAATG
-------ATTTGAATT
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AGAAGCCCTGTGAATG
------CCTTTGATGT
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AGAAGCCCTGTGAATG
------CSTGGGAAAD
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.48
Offset:1
Orientation:forward strand
Alignment:AGAAGCCCTGTGAATG-
-AAGCACCTGTCAATAT
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:AGAAGCCCTGTGAATG--
--------TTTGAAACCG
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGCCCTGTGAATG
GGTTAGAGACCT--------
 A C G T A C G T A C G T A C G T C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.46
Offset:1
Orientation:forward strand
Alignment:AGAAGCCCTGTGAATG-
-TAAGCCACTTGAATTT
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G A C G T
A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:AGAAGCCCTGTGAATG-----
----NTTNTATGAATGTGNNC
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:AGAAGCCCTGTGAATG
----TNCCTTTGATGT
 C G T A T C A G C G T A C T G A C T A G A G T C A G T C G T A C C G A T C A T G G C A T C T A G G C T A C T G A C A G T A C T G
A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T