Information for 11-GCTTKGTKTGRAW (Motif 17)

A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T
Reverse Opposite:
C G T A A C G T A G C T A G T C C G T A G T A C C G T A A G T C G T A C C T G A C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.065e+01
Information Content per bp:1.876
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 25.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTTKGTKTGRAW
CCWTTGTYYB---
 A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTTKGTKTGRAW
CCTTTGTTTT---
 A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTTKGTKTGRAW--
CCATTGTATGCAAAT
 A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTTKGTKTGRAW
-CTTTGT------
 A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCTTKGTKTGRAW
--TAGGTGTGAAG
 A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T
A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCTTKGTKTGRAW
---AGGTGTGAAA
 A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTTKGTKTGRAW---
GAAAAGGTGTGAAAATT
 A C G T A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCTTKGTKTGRAW
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTTKGTKTGRAW
YCTTTGTTCC---
 A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTTKGTKTGRAW--
--AAGGTGTGAAAAT
 A C T G A G T C A C G T A G C T C A T G A C T G A C G T A C T G A C G T A C T G C T G A C G T A C G A T A C G T A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T