Information for 9-GCTTGGGAAC (Motif 16)

A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C A G T C A G T C C T G A C G T A A C T G A G T C
p-value:1e-6
log p-value:-1.595e+01
Information Content per bp:1.959
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 18.5bp
Average Position of motif in Background45.1 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GCTTGGGAAC-
-CSTGGGAAAD
 A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTTGGGAAC--
SCCTAGCAACAG
 A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGGGAAC----
NNNNTTGGGCACNNCN
 A C G T A C G T A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCTTGGGAAC----
----TGGAACAGMA
 A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCTTGGGAAC-
KGTTGCTAGGMAACA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGGGAAC
TTCTNMGGAA-
 A C G T A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTTGGGAAC
GCTCGGSCTC
 A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCTTGGGAAC---
CCGCATAGCAACGGA
 A C G T A C G T A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTTGGGAAC
GGGCGGGACC
 A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCTTGGGAAC
GTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G C T A C T G A C T G A C T G C G T A C G T A A G T C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C