Information for 8-TTGGCATACGCTBGGH (Motif 13)

C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
Reverse Opposite:
C A G T G T A C G T A C T C G A C G T A C T A G A G T C C T A G A C G T C G T A A C G T A C T G G T A C G T A C G T C A G C T A
p-value:1e-7
log p-value:-1.668e+01
Information Content per bp:1.740
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.9 +/- 19.1bp
Average Position of motif in Background62.3 +/- 15.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1B/MA0792.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCATACGCTBGGH
ATTTGCATA--------
 A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCATACGCTBGGH
ATTTGCATA--------
 A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATACGCTBGGH
AATTTGCATANT------
 A C G T A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGCATACGCTBGGH
TNTAATTTGCATACNA-----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGCATACGCTBGGH
TNTAATTTGCATACNA-----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCATACGCTBGGH
ATTTGCATAT-------
 A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGGCATACGCTBGGH
ATTTGCATAA-------
 A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTGGCATACGCTBGGH
TNTAATTTGCATANNN-----
 A C G T A C G T A C G T A C G T A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCATACGCTBGGH
TAATTTGCATAA-------
 A C G T A C G T A C G T C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGGCATACGCTBGGH
-ATGMATATDC-----
 C G A T A C G T C A T G A C T G G T A C C G T A A C G T C G T A A G T C C T A G A G T C C G A T A C G T A C T G A C T G G T C A
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T A C G T A C G T