Information for 8-CCGCCGCGCCTTT (Motif 10)

A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A G T C A A C T G A T C G A T G C A C T G G T A C A T C G A C T G A G T C C A T G A T C G
p-value:1e-7
log p-value:-1.693e+01
Information Content per bp:1.834
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.0 +/- 27.5bp
Average Position of motif in Background40.6 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCGCGCCTTT-
NNGGCCACGCCTTTN
 A C G T A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCGCCGCGCCTTT--
NTCGCGCGCCTTNNN
 A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGCCGCGCCTTT--
ANCGCGCGCCCTTNN
 A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCGCCGCGCCTTT
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCGCCGCGCCTTT----
---NNGCACCTTTCTCC
 A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGCGCCTTT--
ATCCCCGCCCCTAAAA
 A C G T A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCGCCGCGCCTTT
--GCCMCRCCCH-
 A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGCGCCTTT---
TACGCCCCGCCACTCTG
 A C G T A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCGCCGCGCCTTT
--AGCGCGCC---
 A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGCGCCTTT--
TCACCCCGCCCCAAATT
 A C G T A C G T A T G C G A T C A C T G A G T C A T G C A C T G A G T C A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T