Information for 2-TTGATTTAAACAGAAG (Motif 2)

A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
Reverse Opposite:
G T A C C G A T A C G T A G T C G A C T C T A G G A C T C G A T C G A T G T C A G T C A C G T A A C G T A T G C C G T A G T C A
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.715
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.2 +/- 20.4bp
Average Position of motif in Background45.4 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTGATTTAAACAGAAG
NANTTCATTGAATTA----
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGATTTAAACAGAAG
NTTGATTNNATCAN---
 A C G T A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGATTTAAACAGAAG
TTGATTGN--------
 A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGATTTAAACAGAAG
TTGACTTTT-------
 A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTGATTTAAACAGAAG
NNCATTCATTCATNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T A C G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTGATTTAAACAGAAG
CTAATTTAATCAA---
 A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGATTTAAACAGAAG
ATTGATTYND-------
 A C G T A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTGATTTAAACAGAAG
TTTGATTGATGN-----
 A C G T A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TTGATTTAAACAGAAG
NNNTATTGAATTGNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TTGATTTAAACAGAAG
CNGTGATTTN--------
 A C G T A C G T A C G T A C G T A T C G C G T A G C A T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G G T C A C G T A C A T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T