Information for 2-GAATCTGCGC (Motif 6)

A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C C G T A A C T G C G T A A C G T A G C T A G T C
p-value:1e-3
log p-value:-9.037e+00
Information Content per bp:1.962
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 23.7bp
Average Position of motif in Background45.7 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAATCTGCGC
AAATCACTGC
 A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAATCTGCGC
CGCAGCTGCG-
 A C G T A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAATCTGCGC-
AAATCACAGCA
 A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAATCTGCGC-
GCGCCTGCGCA
 A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAATCTGCGC-
-WDNCTGGGCA
 A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAATCTGCGC
NTGGAATGTN---
 A C G T A C G T A C G T A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAATCTGCGC
CAAATCACTG-
 A C G T A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAATCTGCGC---
NNGCNCTGCGCGGC
 A C G T A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GAATCTGCGC
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAATCTGCGC
SNGCACCTGCHS
 A C G T A C G T A C T G C T G A C G T A A C G T A G T C A C G T A C T G A G T C A C T G A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C