Information for 14-TGGCAGGTCG (Motif 26)

A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A G T C A G T C A C G T A C T G A G T C A G T C C G T A
p-value:1e-5
log p-value:-1.272e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.2 +/- 31.9bp
Average Position of motif in Background48.9 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGGTCG--
GGATTGACAGGTCNTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGGTCG--
NTATTGACAGGTNNTN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGGTCG--
NTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGGTCG---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGCAGGTCG--
SDGCAGGTGCNS
 A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGCAGGTCG
TGGCAGTTGN
 A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGGTCG
CTTGGCAA----
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGGCAGGTCG
-AACAGGTGT
 A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGGTCG--
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGGTCG--
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C T G A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T