Information for 6-GCSWCTCCTYAGS (Motif 16)

A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T C T A G C G T A A C T G A C T G C G T A A C T G C G A T A T G C A C T G A G T C
p-value:1e-9
log p-value:-2.123e+01
Information Content per bp:1.884
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.8 +/- 34.3bp
Average Position of motif in Background26.6 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCSWCTCCTYAGS-
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCSWCTCCTYAGS
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCSWCTCCTYAGS
NNGGCCACGCCTTTN-
 A C G T A C G T A C G T A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GCSWCTCCTYAGS----
-----GCCTCAGGGCAT
 A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCSWCTCCTYAGS----
-----SCCTSAGGSCAW
 A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCSWCTCCTYAGS----
--NTNGCCTCAGGCNNN
 A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCSWCTCCTYAGS
GCCMCRCCCH---
 A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCSWCTCCTYAGS----
--NTCGCCTCAGGCAAT
 A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCSWCTCCTYAGS--
----AGCCTCAGGCA
 A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCSWCTCCTYAGS--
----CGCCTCAGGCA
 A C T G A G T C A T C G C G T A A G T C A C G T A G T C A G T C A C G T A G C T C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A