Information for 18-CAGAATACTGAAG (Motif 18)

A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G
Reverse Opposite:
A G T C C G A T A G C T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.898e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.8 +/- 19.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGAATACTGAAG
---NNNANTGA--
 A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAGAATACTGAAG--
CATACAATACGAAATAA
 A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CAGAATACTGAAG
AACACCAAAACAAAGGA-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T

SPIC/MA0687.1/Jaspar

Match Rank:4
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAGAATACTGAAG--
-AAAAAGAGGAAGTA
 A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G A C G T A C G T
A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAGAATACTGAAG
-AGGAAACAGCTG
 A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

SPI1/MA0080.4/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAGAATACTGAAG--
-AAAAAGCGGAAGTA
 A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G A C G T A C G T
A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.48
Offset:-8
Orientation:reverse strand
Alignment:--------CAGAATACTGAAG----
TGCCNACCWAGAATACTDTATCMAR
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------CAGAATACTGAAG
CAATTGCAAAAATAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---CAGAATACTGAAG
NTTNAGAACAATTA--
 A C G T A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CAGAATACTGAAG--
-CTAATATTGCTAAA
 A G T C C G T A A C T G C G T A C G T A C G A T C G T A A G T C A C G T A C T G C T G A C G T A A C T G A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A