Information for 2-GSCACGTGGBSSB (Motif 3)

A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
Reverse Opposite:
T A C G A T G C A T C G T C G A T A G C A G T C C G T A A G T C A C T G A G C T A C T G T A C G T A G C
p-value:1e-35
log p-value:-8.265e+01
Information Content per bp:1.592
Number of Target Sequences with motif172.0
Percentage of Target Sequences with motif20.31%
Number of Background Sequences with motif3245.5
Percentage of Background Sequences with motif6.96%
Average Position of motif in Targets53.3 +/- 22.9bp
Average Position of motif in Background50.7 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-GSCACGTGGBSSB
NNCCACGTGG----
 A C G T A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GSCACGTGGBSSB
GNCACGTG-----
 A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:GSCACGTGGBSSB
--CACGTGGN---
 A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:4
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GSCACGTGGBSSB
NNCACGTGGT---
 A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--GSCACGTGGBSSB
NNACCACGTGGT---
 A C G T A C G T A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:GSCACGTGGBSSB
-CCACGTGGNN--
 A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:GSCACGTGGBSSB
--CACGTGBN---
 A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:8
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:GSCACGTGGBSSB
NGCACGTGNT---
 A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GSCACGTGGBSSB
GHCACGTG-----
 A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.94
Offset:2
Orientation:forward strand
Alignment:GSCACGTGGBSSB
--CACGTG-----
 A C T G A T G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T T A G C T A C G A T G C
A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T