p-value: | 1e-14 |
log p-value: | -3.363e+01 |
Information Content per bp: | 1.603 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 2.38% |
Number of Background Sequences with motif | 68.7 |
Percentage of Background Sequences with motif | 0.15% |
Average Position of motif in Targets | 50.1 +/- 19.0bp |
Average Position of motif in Background | 48.7 +/- 33.4bp |
Strand Bias (log2 ratio + to - strand density) | -1.9 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox17/MA0078.1/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGACAVTGCS -GACAATGNN |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGACAVTGCS VRRACAAWGG- |
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Sox6/MA0515.1/Jaspar
Match Rank: | 3 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGACAVTGCS AAAACAATGG- |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGACAVTGCS GGAACAAAGR- |
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SOX10/MA0442.1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGACAVTGCS --ACAAAG-- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 6 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGACAVTGCS TRAGGTCA----- |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGACAVTGCS RAACAATGGN |
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FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGACAVTGCS-- NAGGTCANTGACCT |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGACAVTGCS GAACAATGGN |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 10 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGACAVTGCS AGGTCA----- |
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