Information for 9-TTGAATTTCC (Motif 8)

A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C
Reverse Opposite:
A C T G C A T G T G C A C T G A C G T A A C G T A C G T G T A C G T C A G T C A
p-value:1e-14
log p-value:-3.270e+01
Information Content per bp:1.844
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif35.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets60.6 +/- 27.7bp
Average Position of motif in Background42.9 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTGAATTTCC
GGGAATTTCC
 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TTGAATTTCC
GGGAATTTCC
 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAATTTCC-
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGAATTTCC
GGGGATTTCC
 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0115.1_Ehf_2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTGAATTTCC------
TAGTATTTCCGATCTT
 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTGAATTTCC
ATTTGAATT---
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TTGAATTTCC---
---ATTTTCCATT
 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.67
Offset:4
Orientation:forward strand
Alignment:TTGAATTTCC----
----ATTTCCTGTN
 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTGAATTTCC---
---ATTTTCCATT
 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTGAATTTCC--
GGGAAATCCCCN
 A C G T A C G T A C T G C G T A C G T A C G A T A G C T A C G T G T A C G T A C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T