Information for 2-SSGCGGGCRRTKCAAA (Motif 2)

A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
Reverse Opposite:
C A G T A C G T A G C T T A C G T G A C G C T A G A C T A G C T C A T G A T G C A T G C A T G C T A C G A T G C A T C G T A G C
p-value:1e-24
log p-value:-5.755e+01
Information Content per bp:1.563
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif157.1
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets51.2 +/- 20.8bp
Average Position of motif in Background47.9 +/- 40.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:SSGCGGGCRRTKCAAA
-GGCGGGAAAH-----
 A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:SSGCGGGCRRTKCAAA
TGGCGGGAAAHB----
 A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:SSGCGGGCRRTKCAAA
GGGCGGGAAGG-----
 A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--SSGCGGGCRRTKCAAA
BTKGGCGGGAAA------
 A C G T A C G T A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:SSGCGGGCRRTKCAAA-
--------NATTCAAAT
 A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SSGCGGGCRRTKCAAA
-GGCGGGAARN-----
 A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SSGCGGGCRRTKCAAA
CWGGCGGGAA-------
 A C G T A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SSGCGGGCRRTKCAAA
TTCGCGCGAAAA-----
 A C G T A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----SSGCGGGCRRTKCAAA
ATAAAGGCGCGCGAT-----
 A C G T A C G T A C G T A C G T A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:SSGCGGGCRRTKCAAA
GGGCGGGAAGG-----
 A T C G A T G C A T C G A T G C A T C G A T C G A T C G G T A C T C G A C T G A C G A T A C T G A G T C C T G A G T C A G T C A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T