Information for 7-GGCTGBCAKYCAG (Motif 16)

A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T C T A G C T A G G T A C A G C T A C T G T C G A A G T C C G T A A C T G A G T C A G T C
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets43.4 +/- 25.2bp
Average Position of motif in Background45.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GGCTGBCAKYCAG
GSCTGTCACTCA-
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGBCAKYCAG
TGGCAGNCTGCCAG
 A C G T A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGCTGBCAKYCAG
-SCTGTCAVTCAV
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GGCTGBCAKYCAG
-NCTGTCAATCAN
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCTGBCAKYCAG
VGCTGWCAVB---
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGCTGBCAKYCAG
-GCTGTCAA----
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGBCAKYCAG
TGTCTGDCACCT--
 A C G T A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGCTGBCAKYCAG
NGTAGGTTGGCATNNN-
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCTGBCAKYCAG
--YTGWCADY---
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCTGBCAKYCAG
-CCTGTCAA----
 A C T G A C T G A G T C A C G T A C T G A C G T A G T C C T G A C A G T A G T C A G T C C G T A A C T G
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T