Information for 5-CTCTGTTGCT (Motif 7)

G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T
Reverse Opposite:
C G T A A C T G G A T C C G T A T G C A A G T C G T C A A C T G G C T A A C T G
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.841
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif138.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets57.4 +/- 23.3bp
Average Position of motif in Background48.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTCTGTTGCT----
--CTGTTGCTAGGS
 G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTCTGTTGCT------
-NCCGTTGCTANGNGN
 G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCTGTTGCT------
-NNCGTTGCTATGGNN
 G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGTTGCT----------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

SCRT2/MA0744.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGTTGCT-
CCACCTGTTGCAT
 A C G T A C G T G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGTTGCT-
ANCCACCTGTTGCNC
 A C G T A C G T A C G T A C G T G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGTTGCT
BRRCVGTTDN-
 A C G T G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTTGCT
YCTTTGTTCC-
 A C G T G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCTGTTGCT--------
---KGTTGCTAGGMAACA
 G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCTGTTGCT-
GTCTGTGGTTT
 G T A C C G A T A G T C C A G T A C T G A C G T A C G T C T A G T G A C A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T