Information for 5-CCTRTAATTA (Motif 3)

T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A
Reverse Opposite:
G A C T C T G A C G T A C G A T A C G T C G T A A G T C C T G A A C T G A C T G
p-value:1e-18
log p-value:-4.166e+01
Information Content per bp:1.617
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif8.82%
Number of Background Sequences with motif1250.3
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets49.4 +/- 25.5bp
Average Position of motif in Background50.6 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ALX3/MA0634.1/Jaspar

Match Rank:1
Score:0.83
Offset:2
Orientation:forward strand
Alignment:CCTRTAATTA--
--TCTAATTAAA
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T A C G T
A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

VAX1/MA0722.1/Jaspar

Match Rank:2
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:CCTRTAATTA-
---NTAATTAG
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T
A C G T A C G T A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G

VSX1/MA0725.1/Jaspar

Match Rank:3
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:CCTRTAATTA-
---NTAATTAG
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T
A C G T A C G T A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G

MIXL1/MA0662.1/Jaspar

Match Rank:4
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:CCTRTAATTA--
--NNTAATTANN
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T A C G T
A C G T A C G T A C T G A G C T C G A T T C G A T C G A C G A T A G C T C T G A T C A G G C T A

Dlx2/MA0885.1/Jaspar

Match Rank:5
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:CCTRTAATTA-
---NTAATTGN
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T
A C G T A C G T A C G T C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C

EN1/MA0027.2/Jaspar

Match Rank:6
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:CCTRTAATTA-
---CTAATTAG
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T
A C G T A C G T A C G T A G T C G C A T T C G A C G T A A C G T A C G T C T G A T A C G

VAX2/MA0723.1/Jaspar

Match Rank:7
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:CCTRTAATTA-
---NTAATTAG
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T
A C G T A C G T A C G T T C A G G A C T G T C A G C T A C G A T C A G T C T G A T C A G

DLX6/MA0882.1/Jaspar

Match Rank:8
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:CCTRTAATTA-
---NTAATTGN
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T
A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

PDX1/MA0132.2/Jaspar

Match Rank:9
Score:0.81
Offset:3
Orientation:forward strand
Alignment:CCTRTAATTA-
---GTAATTAG
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T
A C G T A C G T A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G

Lhx4/MA0704.1/Jaspar

Match Rank:10
Score:0.81
Offset:3
Orientation:forward strand
Alignment:CCTRTAATTA-
---TTAATTAA
 T G A C G T A C A G C T T C A G G C A T T G C A G C T A A C G T A G C T C T G A A C G T
A C G T A C G T A C G T A G C T G A C T T G C A C G T A A C G T A G C T C T G A T C G A