Information for 4-CAGTGAGAGATGAGGG (Motif 14)

A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
Reverse Opposite:
A G T C G T A C G T A C A G C T A G T C C G T A A C G T A G T C A G C T T G A C A C G T A G T C C G T A A G T C C G A T A C T G
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.893
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 17.7bp
Average Position of motif in Background40.3 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGTGAGAGATGAGGG
--ATGATKGATGRC--
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGTGAGAGATGAGGG
---TGATTGATGA---
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CAGTGAGAGATGAGGG
NNNNTGCCAGTGATTG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAGTGAGAGATGAGGG
-----ANAGATAAGAA
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Gata4/MA0482.1/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGTGAGAGATGAGGG
----NNGAGATAAGA-
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGTGAGAGATGAGGG
---TGATTRATGGCY-
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
A C G T A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CAGTGAGAGATGAGGG
------CAGATAAGGN
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:CAGTGAGAGATGAGGG--
--------TATGCGGGTA
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CAGTGAGAGATGAGGG
------NAGATAAGNN
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGTGAGAGATGAGGG
-TTTGATTGATGN---
 A G T C C G T A A C T G A C G T A C T G C G T A A C T G C T G A A C T G C G T A A C G T C T A G C T G A A C T G A C T G A C T G
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T A C G T