Information for 10-CGCCWGAGGGCGS (Motif 11)

A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
Reverse Opposite:
A T C G G A T C C A T G T A G C A G T C A G T C A C G T A T G C C G A T C T A G A T C G G A T C A T C G
p-value:1e-9
log p-value:-2.281e+01
Information Content per bp:1.724
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.88%
Number of Background Sequences with motif471.2
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets49.7 +/- 25.5bp
Average Position of motif in Background49.8 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CGCCWGAGGGCGS-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGCCWGAGGGCGS
-GCCTCAGGGCAT
 A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGCCWGAGGGCGS
-SCCTSAGGSCAW
 A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGCCWGAGGGCGS
TCACCTCTGGGCAG
 A C G T A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGCCWGAGGGCGS
TGCCCNGGGGCA-
 A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGCCWGAGGGCGS
ATTGCCTGAGGCAAT
 A C G T A C G T A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGCCWGAGGGCGS--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGCCWGAGGGCGS
NGCCTGAGGCN--
 A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCCWGAGGGCGS
AGCCTCAGGCA--
 A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCCWGAGGGCGS
TGCCTGAGGCN--
 A T G C C T A G A T G C A G T C C G T A A T C G G T C A A C T G A C T G A T C G G T A C C T A G A T G C
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T