Information for 4-CCASGGCTGTGGGAGA (Motif 9)

G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A
Reverse Opposite:
C G A T A G T C C G A T G T A C G T A C A T G C C G T A G T A C G C T A A C T G A G T C A G T C A T C G A G C T C T A G C A T G
p-value:1e-10
log p-value:-2.437e+01
Information Content per bp:1.704
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.2 +/- 24.8bp
Average Position of motif in Background59.7 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:1
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCASGGCTGTGGGAGA-
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T A C G T G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

ZIC1/MA0696.1/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCASGGCTGTGGGAGA
GACCCCCCGCTGTG-----
 A C G T A C G T A C G T G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCASGGCTGTGGGAGA
ATCCAC------------
 A C G T A C G T G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCASGGCTGTGGGAGA-
-----NGCGTGGGCGGR
 G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

TBX19/MA0804.1/Jaspar

Match Rank:5
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----CCASGGCTGTGGGAGA
TTTCACACCTAGGTGTGAAA
 A C G T A C G T A C G T A C G T G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A
C G A T C A G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A G C T A G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:CCASGGCTGTGGGAGA-
-------CSTGGGAAAD
 G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:forward strand
Alignment:CCASGGCTGTGGGAGA
-----GCTGTG-----
 G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

T/MA0009.2/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CCASGGCTGTGGGAGA
TCACACCTAGGTGTGA--
 A C G T A C G T G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A
G A C T T G A C C T G A A G T C C T G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CCASGGCTGTGGGAGA
GACCCCCCGCTGCGC----
 A C G T A C G T A C G T G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CCASGGCTGTGGGAGA
CCCCCTGCTGTG-----
 A C G T G A T C A G T C C T G A A T G C C T A G C T A G T A G C C A G T A C T G C G A T A T C G C A T G A C T G G C T A C T A G C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T