Information for 3-RTRRYTATRTGKT (Motif 3)

C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A G T A C G T A C C G T A A G T C C T G A A C G T C G T A C T G A A G C T A G C T C G T A A G T C
p-value:1e-21
log p-value:-4.934e+01
Information Content per bp:1.817
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.7 +/- 21.8bp
Average Position of motif in Background8.9 +/- 1.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0004.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RTRRYTATRTGKT----
NTNNTTAAGTGGTTANN
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

OLIG2/MA0678.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:RTRRYTATRTGKT
---ACCATATGGT
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:RTRRYTATRTGKT---
----NNHTGTGGTTWN
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

OLIG1/MA0826.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RTRRYTATRTGKT
---AACATATGTT
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RTRRYTATRTGKT
---ANCATATGGT
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

BHLHE23/MA0817.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:RTRRYTATRTGKT-
--NAACATATGTTT
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:RTRRYTATRTGKT
----TTAAGTGGT
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RTRRYTATRTGKT----
NTNNTTAAGTGGNTNAN
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

BHLHE22/MA0818.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RTRRYTATRTGKT
---ANCATATGGT
 C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

PH0022.1_Dlx3/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----RTRRYTATRTGKT
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T A C G T C T A G A C G T C T G A C T G A A G C T A C G T C G T A A G C T C T A G A C G T A C T G A C T G A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A