Information for 18-TGATTTAAAGTAA (Motif 22)

A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T C G T A A G T C A C G T C G A T A C G T C G T A C G T A C G T A A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.190e+01
Information Content per bp:1.929
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets20.6 +/- 14.3bp
Average Position of motif in Background75.6 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGATTTAAAGTAA
-NATTCAAAT---
 A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGATTTAAAGTAA
NTGATTTATGGCC-
 A C G T A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGATTTAAAGTAA
TGATTTATGGCC-
 A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGATTTAAAGTAA
TGATTTATGGC--
 A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGATTTAAAGTAA
CNGTGATTTN------
 A C G T A C G T A C G T A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGATTTAAAGTAA----
TGCTTTCTAGGAATTCA
 A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGATTTAAAGTAA----
NNNTTTTAATTAANNNN
 A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGATTTAAAGTAA-
NGCTTTCTAGGAAN
 A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

PH0101.1_Lmx1b/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGATTTAAAGTAA----
AGTTTTTAATTAATTTG
 A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGATTTAAAGTAA
TGATTTATGGCC-
 A C G T C T A G G T C A A C G T C G A T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A
C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C A C G T