Information for 13-GCCTGTGATGGAT (Motif 17)

A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T
Reverse Opposite:
C G T A G C A T A G T C G A T C C G T A G A C T A G T C G C T A G A T C C G T A A C T G T C A G T A G C
p-value:1e-8
log p-value:-1.908e+01
Information Content per bp:1.660
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif223.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets49.6 +/- 27.3bp
Average Position of motif in Background54.2 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCCTGTGATGGAT
-GCTGTG------
 A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCCTGTGATGGAT
-GCTGTGGTTT--
 A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCCTGTGATGGAT
NNHTGTGGTTWN-
 A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GCCTGTGATGGAT---
----ATGATKGATGRC
 A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCTGTGATGGAT-
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCTGTGATGGAT-
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGTGATGGAT
TNCCTTTGATGT--
 A C G T A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCTGTGATGGAT
-CCTTTGAWGT--
 A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T
A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGTGATGGAT-
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCTGTGATGGAT
GTCTGTGGTTT--
 A C T G A G T C T G A C C G A T C A T G C G A T A C T G C T G A G C A T C A T G C T A G C G T A G C A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T