Information for 2-AACCCAVCCTCTCCHC (Motif 5)

C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
Reverse Opposite:
A C T G C A T G A C T G C T A G C T G A A C T G C G T A C T A G A C T G A T G C A C G T A C T G A C T G A C T G A G C T A C G T
p-value:1e-11
log p-value:-2.725e+01
Information Content per bp:1.831
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 21.7bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACCCAVCCTCTCCHC
-GCCCCGCCCCCTCCC
 C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AACCCAVCCTCTCCHC
ANNTNCCCACCCANNAC--
 A C G T A C G T A C G T C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AACCCAVCCTCTCCHC
NAGCCCCGCCCCCN---
 A C G T C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AACCCAVCCTCTCCHC
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T A C G T C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0097.1_Zfp281_1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AACCCAVCCTCTCCHC
TCCCCCCCCCCCCCC-
 C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AACCCAVCCTCTCCHC
-GCCCCGCCCCC----
 C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AACCCAVCCTCTCCHC
CTATCCCCGCCCTATT---
 A C G T A C G T A C G T C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AACCCAVCCTCTCCHC
CCCCCGCCCCCGCC--
 C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AACCCAVCCTCTCCHC
NRGCCCCRCCCHBNN---
 A C G T A C G T C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AACCCAVCCTCTCCHC
GGCCACACCCA------
 A C G T C G T A C T G A A G T C G T A C A G T C C G T A T A C G A G T C A G T C G A C T A G T C A G C T A G T C A G T C G A T C G T A C
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T