Information for 1-GGGGAGGCAAAGG (Motif 3)

A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G
Reverse Opposite:
A G T C G T A C G C A T A G C T A C G T A T C G G A T C T G A C G A C T A G T C A G T C A G T C G T A C
p-value:1e-11
log p-value:-2.725e+01
Information Content per bp:1.643
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 26.3bp
Average Position of motif in Background34.3 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGGAGGCAAAGG---
--TGGGGCAAAGGTCA
 A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G A C G T A C G T A C G T
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGGAGGCAAAGG---
-GTAGGGCAAAGGTCA
 A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G A C G T A C G T A C G T
A C G T A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGGGAGGCAAAGG---
--TAGGGCAAAGGTCA
 A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G A C G T A C G T A C G T
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGAGGCAAAGG
NNTNAGGGGCGGNNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGGAGGCAAAGG
-GGGCGGGAAGG-
 A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGGAGGCAAAGG---
-AGGGGTCAGAGGTCA
 A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G A C G T A C G T A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGAGGCAAAGG
NNTNNGGGGCGGNGNGN-
 A C G T A C G T A C G T A C G T A C G T A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGGCAAAGG-------
GGAGGAGGAGGGGGAGGAGGA
 A C G T A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T G A C A T G T A C G G C T A C A T G T C A G T C G A T C A G C T A G C T A G C T A G T C A G C T G A C T A G C T A G C T G A C T A G C T A G C T G A

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGGCAAAGG
TGGGGA--------
 A C G T A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGGGAGGCAAAGG----
---CAGGCCNNGGCCNN
 A C T G T C A G C T A G T C A G C T G A A C T G C T A G T A G C G T C A T C G A C G T A C A T G T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C