Information for 6-ATATATCAGT (Motif 15)

C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T
Reverse Opposite:
C G T A A G T C C G A T A T C G C G T A A C G T G T C A C G A T C G T A A C G T
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.860
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif15.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.8 +/- 28.3bp
Average Position of motif in Background45.8 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----ATATATCAGT--
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----ATATATCAGT--
ATGGGATATATCCGCCT
 A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATATATCAGT
GCCATAAATCA--
 A C G T A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATATATCAGT
TCATCAATCA--
 A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATATATCAGT
GGCCATAAATCA--
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATATATCAGT
AATGTATCAAT
 A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATATATCAGT
GGCCATAAATCAC-
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATATATCAGT-
TCTTTATATATAAATA
 A C G T A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATATATCAGT
GGCCATAAATCA--
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATATATCAGT
RGCCATYAATCA--
 A C G T A C G T A C G T A C G T C G T A C G A T C G T A A C G T G T C A A C G T A T G C C G T A C T A G A C G T
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T A C G T