Information for 7-AAAAGGCGGA (Motif 6)

T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A
Reverse Opposite:
C G A T A G T C A G T C A T C G A T G C A T G C G A C T A G C T A G C T A G C T
p-value:1e-12
log p-value:-2.893e+01
Information Content per bp:1.660
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif5.70%
Number of Background Sequences with motif773.0
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets44.8 +/- 25.5bp
Average Position of motif in Background49.2 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AAAAGGCGGA-
TAATGGCGGNC
 T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A A C G T
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAAGGCGGA----
AAAAAGCGGAAGTA
 T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A A C G T A C G T A C G T A C G T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGCGGA
CAAGATGGCGGC
 A C G T A C G T T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

SPIC/MA0687.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAAGGCGGA----
AAAAAGAGGAAGTA
 T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A A C G T A C G T A C G T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGGCGGA--
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGCGGA
CAAGATGGCGGC
 A C G T A C G T T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAAGGCGGA-----
CAAAGGCGTGGCCAG
 T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A A C G T A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAAGGCGGA----
AGGGGGCGGGGCTG
 T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A A C G T A C G T A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAAGGCGGA--
RGKGGGCGGAGC
 T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A A C G T A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGGCGGA-----
NAGANTGGCGGGGNGNA
 A C G T A C G T T C G A T C G A T C G A C T G A T A C G T A C G T A G C T A C G T C A G G C T A A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A