Information for 14-AGCATGTTCT (Motif 16)

C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T
Reverse Opposite:
C T G A A T C G T G C A G C T A A T G C G T C A A C G T A C T G A G T C A C G T
p-value:1e-5
log p-value:-1.214e+01
Information Content per bp:1.778
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif389.4
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets48.4 +/- 20.1bp
Average Position of motif in Background49.0 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGCATGTTCT
DCTCAGCAGG----
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCATGTTCT
CAGCC------
 A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AGCATGTTCT
GAGCACAGCAGGACA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AGCATGTTCT
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCATGTTCT-
SDGCAGGTGCNS
 A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGCATGTTCT-------
GGYAGCAYDTGCTDCCCNNN
 A C G T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AGCATGTTCT
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGCATGTTCT
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGCATGTTCT-
CTACTAGGATGTNNTN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGCATGTTCT
GTCAGCANNTN--
 A C G T A C G T A C G T C G T A A C T G A G T C G T C A A C G T A T C G C G A T A C G T A T G C G A C T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T