| p-value: | 1e-8 |
| log p-value: | -2.038e+01 |
| Information Content per bp: | 1.840 |
| Number of Target Sequences with motif | 21.0 |
| Percentage of Target Sequences with motif | 2.26% |
| Number of Background Sequences with motif | 187.3 |
| Percentage of Background Sequences with motif | 0.43% |
| Average Position of motif in Targets | 51.0 +/- 24.5bp |
| Average Position of motif in Background | 56.0 +/- 30.4bp |
| Strand Bias (log2 ratio + to - strand density) | -0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 1 |
| Score: | 0.65
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCCCTACTGC-
CCCCCTGCTGTG |
|
|
|
PB0150.1_Mybl1_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GCCCTACTGC----
CGACCAACTGCCGTG |
|
|
|
PB0205.1_Zic1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.64
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCCCTACTGC----
TNTCCTGCTGTGNNG |
|
|
|
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
| Match Rank: | 4 |
| Score: | 0.63
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---GCCCTACTGC--
GGCCYCCTGCTGDGH |
|
|
|
PB0086.1_Tcfap2b_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --GCCCTACTGC--
NTGCCCTAGGGCAA |
|
|
|
PB0206.1_Zic2_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.63
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCCCTACTGC----
TCNCCTGCTGNGNNN |
|
|
|
TFAP2A(var.2)/MA0810.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GCCCTACTGC-
TGCCCCCGGGCA |
|
|
|
TFAP2B/MA0811.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -GCCCTACTGC-
TGCCCCAGGGCA |
|
|
|
PB0207.1_Zic3_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.62
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -GCCCTACTGC----
NNTCCTGCTGTGNNN |
|
|
|
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
| Match Rank: | 10 |
| Score: | 0.61
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | GCCCTACTGC--
--CCTGCTGAGH |
|
|
|
