Information for 5-CCTGGAAAACCCC (Motif 6)

A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C T A G A C G T A C G T A C G T A C G T A T G C A G T C G C T A T C A G A C T G
p-value:1e-14
log p-value:-3.241e+01
Information Content per bp:1.813
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.7 +/- 24.8bp
Average Position of motif in Background39.5 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:CCTGGAAAACCCC
---GGAAATCCCC
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:CCTGGAAAACCCC
---GGAAANCCCC
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:CCTGGAAAACCCC
---GGAAATTCCC
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCTGGAAAACCCC-
--GGGAAATCCCCN
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CCTGGAAAACCCC
---GGAAATTCCC
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCTGGAAAACCCC
--TGGAAAA----
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAAACCCC
NATGGAAAAN---
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCTGGAAAACCCC
-GGGGGAATCCCC
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCTGGAAAACCCC-
-AGGGGATTCCCCT
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C A C G T
A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAAACCCC
AATGGAAAAT---
 A G T C A G T C C A G T A C T G A T C G T C G A C G T A G T C A C G T A G A T C A G T C A G T C A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T