Information for 12-GCGCGAGAGAGCG (Motif 16)

A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A G T C A C G T A G T C C G A T G T A C C A T G G T A C A C T G A T G C
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.841
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.9 +/- 24.0bp
Average Position of motif in Background54.3 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GCGCGAGAGAGCG
--------CAGCC
 A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGAGAGAGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGCGAGAGAGCG-----
-NNNAAGGGGGCGGGNNN
 A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGCGAGAGAGCG--
NNNACCGAGAGTNNN
 A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GCGCGAGAGAGCG
NAGNTCTCGCGAGAN----
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:GCGCGAGAGAGCG
------CGGAGC-
 A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GCGCGAGAGAGCG----
--ATAAGGGCGCGCGAT
 A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GCGCGAGAGAGCG----
--ATAAAGGCGCGCGAT
 A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCGCGAGAGAGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCGCGAGAGAGCG
-GGTTAGAGACCT
 A T C G A G T C A C T G G A T C C A T G C G T A C T A G G T C A A C T G C G T A A C T G A G T C A C T G
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T