Information for 11-CAGGTTTAGGCAAAKA (Motif 15)

A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A
Reverse Opposite:
A C G T G T C A A C G T A C G T A C G T A C T G G T A C A G T C A G C T C T G A C G T A C T G A A T G C G A T C C G A T A T C G
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.737
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif24.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.2 +/- 27.4bp
Average Position of motif in Background54.2 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CAGGTTTAGGCAAAKA
-----TTATGCAAAT-
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CAGGTTTAGGCAAAKA--
-----ATATGCAAATNNN
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

POU2F1/MA0785.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAGGTTTAGGCAAAKA
----AATATGCAAATT
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A
A C G T A C G T A C G T A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGGTTTAGGCAAAKA
-----ATATGCAAAT-
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A
A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CAGGTTTAGGCAAAKA
------TATGCAAAT-
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGGTTTAGGCAAAKA---
---TTGTATGCAAATTAGA
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGGTTTAGGCAAAKA---
---TTGTATGCAAATTAGA
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGGTTTAGGCAAAKA---
---TTGTATGCAAATTAGA
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU3F1/MA0786.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGGTTTAGGCAAAKA-
-----TTATGCAAATTA
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGGTTTAGGCAAAKA-
-----TTATGCAAATTA
 A T G C C G T A C A T G T A C G A G C T A C G T A G C T C T G A C T A G A C T G T A G C C G T A C G T A C G T A C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A