Information for 9-TCAGGCGCASTCA (Motif 10)

A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A
Reverse Opposite:
C G A T A C T G C G T A A T C G C G A T C T A G A T G C C A T G A G T C G T A C A C G T A C T G G T C A
p-value:1e-12
log p-value:-2.825e+01
Information Content per bp:1.806
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 23.7bp
Average Position of motif in Background54.1 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCAGGCGCASTCA--
----AGCCACTCAAG
 A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCAGGCGCASTCA-
----AASCACTCAA
 A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGCGCASTCA---
NNNNTGAGCACTGTNNG
 A C G T A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCAGGCGCASTCA-
----AAGCACTTAA
 A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCAGGCGCASTCA-----
-AAGGCGAAATCATCGCA
 A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCAGGCGCASTCA-
------CCAATCAA
 A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCAGGCGCASTCA---
TACATGTGCACATAAAA
 A C G T A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCAGGCGCASTCA-
----MRSCACTYAA
 A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCAGGCGCASTCA
---TGCTGAGTCA
 A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A
A C G T A C G T A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCAGGCGCASTCA--
-----NSCACTYVAV
 A C G T G T A C C G T A A C T G A C T G G A T C A T C G A G T C C G T A A T G C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G