p-value: | 1e-11 |
log p-value: | -2.585e+01 |
Information Content per bp: | 1.665 |
Number of Target Sequences with motif | 52.0 |
Percentage of Target Sequences with motif | 6.03% |
Number of Background Sequences with motif | 928.8 |
Percentage of Background Sequences with motif | 2.00% |
Average Position of motif in Targets | 56.1 +/- 27.1bp |
Average Position of motif in Background | 49.7 +/- 33.1bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGTCAGATC TRAGGTCA---- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGGTCAGATC AGGTCA---- |
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RORA/MA0071.1/Jaspar
Match Rank: | 3 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGGTCAGATC ATCAAGGTCA---- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 4 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGGTCAGATC AGRGGTCA---- |
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Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGGTCAGATC CAAAGGTCAG--- |
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NR4A2/MA0160.1/Jaspar
Match Rank: | 6 |
Score: | 0.66 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGTCAGATC AAGGTCAC--- |
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Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.64 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGGTCAGATC TCAAGGTCAN--- |
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PB0193.1_Tcfe2a_2/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGGTCAGATC------ AAGGCCAGATGGTCCGG |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AGGTCAGATC AAYTAGGTCA---- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AGGTCAGATC ATGCCAGACN |
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