Information for 7-AAACAGTTCAAGA (Motif 7)

T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A
Reverse Opposite:
C G A T A T G C A C G T A C G T C T A G G T C A C T G A A T G C A G C T A C T G A C G T A C G T A G C T
p-value:1e-11
log p-value:-2.638e+01
Information Content per bp:1.807
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 25.5bp
Average Position of motif in Background62.9 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAACAGTTCAAGA
GAAAAAATTGCAAGG
 A C G T A C G T T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAACAGTTCAAGA
ATAAACAATTAAACA
 A C G T A C G T T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAACAGTTCAAGA---
----AGGTCAAGGTCA
 T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAACAGTTCAAGA
GCAAAACATTACTA--
 A C G T A C G T A C G T T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAACAGTTCAAGA-
GGCAAAAGTCCAATAA
 A C G T A C G T T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAACAGTTCAAGA
GTAAACAG-------
 A C G T A C G T T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAACAGTTCAAGA
NNTNANAACAATTNNA--
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAACAGTTCAAGA-
-GAANGTTCTAGAA
 T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A A C G T
A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAACAGTTCAAGA----
CTAAGGTTCTAGATCAC
 T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAACAGTTCAAGA
NAACAAT------
 T C G A G T C A C G T A G T A C C T G A A T C G A G C T A C G T A G T C G T C A C G T A A T C G C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T