Information for 15-GGTCATCAGTCAG (Motif 21)

A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G C G T A A G T C A C G T A T C G C G T A A C G T A C T G G T C A A G T C A G T C
p-value:1e-7
log p-value:-1.638e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 21.7bp
Average Position of motif in Background67.2 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGTCATCAGTCAG
RGCCATYAATCA-
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGTCATCAGTCAG
--TCATCAATCA-
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGTCATCAGTCAG
-GYCATCMATCAT
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G
A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGTCATCAGTCAG
GGCCATAAATCA-
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGTCATCAGTCAG
-GCCATAAATCA-
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

FOS/MA0476.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGTCATCAGTCAG-
---NATGAGTCANN
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G A C G T
A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

JUND/MA0491.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGTCATCAGTCAG-
---NATGAGTCACN
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

FOS::JUN/MA0099.2/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGTCATCAGTCAG
-----TGAGTCA-
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGTCATCAGTCAG-
--CCATCAATCAAA
 A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G A C G T
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGTCATCAGTCAG
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G A C T G A C G T A G T C G T C A A C G T A T G C C G T A A C T G A C G T A G T C C G T A A T C G
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T