Information for 14-GCCAGCCAAAGCC (Motif 19)

A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A G C T A C G T A C G T A C T G A C T G A G T C A C G T A C T G A T C G A G T C
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.8 +/- 21.4bp
Average Position of motif in Background68.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCAGCCAAAGCC
-BCAGACWA----
 A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCAGCCAAAGCC
---TGCCAA----
 A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCCAGCCAAAGCC
-CCAGACAG----
 A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCAGCCAAAGCC
-CGTGCCAAG---
 A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCCAGCCAAAGCC
AGGTGHCAGACA-----
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCAGCCAAAGCC
TTTCCCGCCAAA---
 A C G T A C G T A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCCAGCCAAAGCC
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGCCAAAGCC
ATGCCAGACN-----
 A C G T A C G T A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCCAGCCAAAGCC
AGGTGNCAGACAG----
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCCAGCCAAAGCC-
----NTCAAGGTCA
 A C T G A T G C A G T C C G T A A C T G G T A C A G T C C G T A C G T A C T G A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A