Information for 10-TGGCCVRGWGCCC (Motif 16)

C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
Reverse Opposite:
C T A G A C T G A T C G A T G C G C A T A G T C G A C T A T G C C T A G A C T G A T G C G T A C G C T A
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.742
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif186.0
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets51.5 +/- 24.5bp
Average Position of motif in Background50.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCVRGWGCCC--
TTGGCANNNTGCCAAG
 A C G T C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCVRGWGCCC
TTGGCATGGTGCCA
 A C G T C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGGCCVRGWGCCC
CTGGCAGNCTGCCA
 A C G T C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGCCVRGWGCCC---
TGACCCAGTGACCTAC
 C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGCCVRGWGCCC
TGCCCNGGGGCA-
 C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGCCVRGWGCCC
TGCCCTNGGGCA-
 C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGCCVRGWGCCC
TGCCCTNGGGCA-
 C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCVRGWGCCC
NTGCCCTTGGGCGN
 A C G T C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCVRGWGCCC
GCTGACCTTGAACTN
 A C G T A C G T C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCVRGWGCCC
NTGCCCTAGGGCAA
 A C G T C G A T A C T G A T C G A G T C G A T C T A C G C T G A A C T G C G T A A T C G A T G C A G T C G A T C
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A