Information for 9-TTGGCATGGACCA (Motif 15)

A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G C T A G T C A G T C C G T A A C G T A C T G A G T C A G T C C G T A C T G A
p-value:1e-9
log p-value:-2.129e+01
Information Content per bp:1.926
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.0 +/- 20.9bp
Average Position of motif in Background44.0 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATGGACCA
GGTTGGCAT------
 A C G T A C G T A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATGGACCA
NNTTGGCANN-----
 A C G T A C G T A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCATGGACCA
NTTGGCANN-----
 A C G T A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGGCATGGACCA
TTGGCA-------
 A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTGGCATGGACCA
NGTAGGTTGGCATNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGGCATGGACCA
-TGGCACGTGCCA
 A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCATGGACCA
NGTGGGCAT------
 A C G T A C G T A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCATGGACCA
CTTGGCAA------
 A C G T A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGGCATGGACCA
-TGGAATGT----
 A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTGGCATGGACCA
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T A G C T A C G T A C T G A C T G G T A C C G T A A C G T A C T G C T A G T C G A A G T C A G T C C G T A
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A