Information for 6-CASAATGTMA (Motif 10)

A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A
Reverse Opposite:
C A G T A C G T C T G A T A G C C G T A A G C T A G C T T A C G C G A T C T A G
p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.754
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif167.8
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets54.0 +/- 22.9bp
Average Position of motif in Background53.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CASAATGTMA
GACAATGNN-
 A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CASAATGTMA-
CTCACACAATGGCGC
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CASAATGTMA
-ACAAAG---
 A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CASAATGTMA-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CASAATGTMA--
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CASAATGTMA--
TACCCACAATGCATTG
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CASAATGTMA--
GGGAACACAATGTTCCC
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CASAATGTMA
NNCNNAACAATTNT-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CASAATGTMA
AACAAT----
 A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CASAATGTMA--
AATGAACAATGGAATT
 A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T G A C T G A A C G T A T C G A G C T G T C A G T C A A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T