Information for 2-CTCCATGTGGCGA (Motif 6)

A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
Reverse Opposite:
A G C T A T G C C T A G A G T C A T G C G T C A A T G C G C T A C G A T C T A G A T C G C G T A C T A G
p-value:1e-10
log p-value:-2.401e+01
Information Content per bp:1.778
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets41.6 +/- 17.5bp
Average Position of motif in Background45.9 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myc/MA0147.2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTCCATGTGGCGA
--CCATGTGCTT-
 A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T

ZBED1/MA0749.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCCATGTGGCGA---
---TATGTCGCGATAG
 A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCCATGTGGCGA
--CCACGTGGNN-
 A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCCATGTGGCGA
---CACGTGGC--
 A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCCATGTGGCGA
-KCCACGTGAC--
 A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCCATGTGGCGA
--CCACGTGGNN-
 A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CTCCATGTGGCGA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCCATGTGGCGA
-RTCATGTGAC--
 A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CTCCATGTGGCGA
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCCATGTGGCGA
-GTCATGTGACC-
 A G T C A C G T A T G C A G T C G C T A C A G T A T C G A C G T A T C G C T A G A G T C T A C G C T G A
A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T