Information for 5-CAGCACCTTGGACAGH (Motif 7)

A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C
Reverse Opposite:
C A G T A G T C A C G T A C T G A C G T G T A C A G T C G T C A C T G A A C T G A T C G A C G T A C T G A T G C C G A T A C T G
p-value:1e-15
log p-value:-3.683e+01
Information Content per bp:1.834
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.4 +/- 22.1bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CAGCACCTTGGACAGH---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-CAGCACCTTGGACAGH---
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAGCACCTTGGACAGH
-----CCAGGAACAG-
 A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.50
Offset:10
Orientation:reverse strand
Alignment:CAGCACCTTGGACAGH
----------CACAGN
 A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CAGCACCTTGGACAGH
NNGGCGACACCTCNNN----
 A C G T A C G T A C G T A C G T A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.49
Offset:8
Orientation:forward strand
Alignment:CAGCACCTTGGACAGH
--------TTGACAGC
 A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---CAGCACCTTGGACAGH
NNNNATGACCTTGANTN--
 A C G T A C G T A C G T A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:CAGCACCTTGGACAGH--
--------TGCCCAGNHW
 A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Esrra/MA0592.2/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CAGCACCTTGGACAGH
-ATGACCTTGAA----
 A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C
A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CAGCACCTTGGACAGH
-ACCACCTGTT-----
 A G T C C G T A T A C G A G T C C G T A A T G C A G T C A G C T A C G T A C T G A C T G G T C A A G T C C G T A A C T G G T A C
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T A C G T