Information for 6-CAAACCACAM (Motif 5)

A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A
Reverse Opposite:
A C G T C G A T A C T G A G C T C T A G C T A G A G C T G A C T C A G T T C A G
p-value:1e-18
log p-value:-4.297e+01
Information Content per bp:1.674
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif14.23%
Number of Background Sequences with motif2656.3
Percentage of Background Sequences with motif5.70%
Average Position of motif in Targets54.1 +/- 25.7bp
Average Position of motif in Background50.2 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CAAACCACAM-
-AAACCACANN
 A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CAAACCACAM
NAAACCACAG
 A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:CAAACCACAM--
NWAACCACADNN
 A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:CAAACCACAM--
-AAACCACAGAN
 A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.93
Offset:1
Orientation:forward strand
Alignment:CAAACCACAM-
-AAACCGCAAA
 A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:CAAACCACAM-
-AAACCACAGC
 A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.91
Offset:1
Orientation:forward strand
Alignment:CAAACCACAM
-AAACCGCAA
 A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAAACCACAM
TCCAATCCACA-
 A C G T A C G T A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAAACCACAM-
SSAATCCACANN
 A C G T A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CAAACCACAM
--ATCCAC--
 A G T C G T C A C T G A C T G A A G T C A G T C T C G A A G T C C G T A T G C A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T