Information for 23-KGRATAGTGTRRC (Motif 33)

A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C
Reverse Opposite:
C T A G A G C T A G T C C G T A A G T C C G T A A G T C A C G T C G T A A C G T A G C T A G T C G T A C
p-value:1e-6
log p-value:-1.393e+01
Information Content per bp:1.880
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 24.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:KGRATAGTGTRRC
---ATGGGGTGAT
 A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KGRATAGTGTRRC--
GHWACAWTGTWDCWA
 A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C A C G T A C G T
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:KGRATAGTGTRRC--
GHTACAWTGTADCHR
 A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:KGRATAGTGTRRC---
-----AATGTATCAAT
 A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-KGRATAGTGTRRC
ATGAATATTC----
 A C G T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--KGRATAGTGTRRC
NNNCCATTGTGTNAN
 A C G T A C G T A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:KGRATAGTGTRRC------
-GGAAAGCGAAACCAAAAC
 A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:KGRATAGTGTRRC-
----AGGTGTGAAM
 A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:KGRATAGTGTRRC
---ATGGGGTGAT
 A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:KGRATAGTGTRRC
----AGGTGTGA-
 A C T G A C T G C T G A C G T A A C G T C G T A A C T G A C G T A C T G A C G T C T A G C T G A A G T C
A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T