Information for 4-ARAACTACAATTCCCR (Motif 3)

G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A
Reverse Opposite:
A G C T A C T G A C T G A T C G C T G A C T G A A G C T G A C T A C T G C G A T C T G A C T A G C G A T A G C T A G C T C G A T
p-value:1e-19
log p-value:-4.562e+01
Information Content per bp:1.635
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif126.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets47.9 +/- 24.9bp
Average Position of motif in Background40.0 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.88
Offset:3
Orientation:forward strand
Alignment:ARAACTACAATTCCCR
---ACTACAATTCCC-
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A
A C G T A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.83
Offset:2
Orientation:forward strand
Alignment:ARAACTACAATTCCCR------
--RACTACAACTCCCAGVAKGC
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ARAACTACAATTCCCR------
--AACTACAATTCCCAGAATGC
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:8
Orientation:forward strand
Alignment:ARAACTACAATTCCCR--
--------HTTTCCCASG
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ARAACTACAATTCCCR
-AAACCACANN-----
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ARAACTACAATTCCCR
NAAACCACAG------
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:ARAACTACAATTCCCR--
--------NYTTCCCGCC
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:ARAACTACAATTCCCR
-----TKCTGTTCCA-
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ARAACTACAATTCCCR
NWAACCACADNN----
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ARAACTACAATTCCCR---
-------VDTTTCCCGCCA
 G C T A T C G A T C G A C G T A G A T C G A C T C G T A G T A C C T G A C T G A G A C T A G C T T A G C T A G C A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A