Information for 16-GCGACAGCCA (Motif 24)

A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T A C T G A C G T A G T C A C T G A G T C
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 29.2bp
Average Position of motif in Background37.5 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCGACAGCCA
GCCACACCCA
 A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCGACAGCCA-
GGCCACACCCAN
 A C G T A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCGACAGCCA-
AGGTGNCAGACAG
 A C G T A C G T A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCGACAGCCA
AGGTGHCAGACA
 A C G T A C G T A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCGACAGCCA
--CACAGN--
 A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCGACAGCCA
GGCCACACCCA
 A C G T A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCGACAGCCA-
---BCAGACWA
 A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCGACAGCCA
----CAGCC-
 A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGACAGCCA--
GCCACRCCCACY
 A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

ZBTB7A/MA0750.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGACAGCCA-
GGCGACCACCGA
 A C G T A C T G A G T C A C T G C G T A A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A