Information for 7-RTSATKCTGAAAA (Motif 9)

C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A
Reverse Opposite:
A C G T A G C T A C G T A G C T T A G C C G T A C T A G G T C A C G T A A C G T T A G C G T C A A G T C
p-value:1e-11
log p-value:-2.552e+01
Information Content per bp:1.721
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif48.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.5 +/- 28.1bp
Average Position of motif in Background42.4 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--RTSATKCTGAAAA
BAGTCATANTGAAAG
 A C G T A C G T C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---RTSATKCTGAAAA--
WNAGTCADAVTGAAACTN
 A C G T A C G T A C G T C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:RTSATKCTGAAAA-
-------TGGAAAA
 C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RTSATKCTGAAAA----------
---NNCCTGNAAAAAAAAAAAAA
 C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RTSATKCTGAAAA--
---TTTCTNAGAAAN
 C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RTSATKCTGAAAA-
---CTTCTGGGAAA
 C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T
A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RTSATKCTGAAAA----------
---NNCCTGNAAAAAAAAAAAAA
 C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:RTSATKCTGAAAA--
----TTCTTGGAAAN
 C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:RTSATKCTGAAAA--
-----NATGGAAAAN
 C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:RTSATKCTGAAAA--
-----ACTGAAACCA
 C T A G C A G T A T C G G T C A G A C T C A G T A G T C A C G T A C T G C T G A C G T A C T G A T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A