Information for 4-CGAGAGTGSCACCGKC (Motif 10)

A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
Reverse Opposite:
A T C G G T C A A G T C A T C G A T C G G A C T A T C G A T G C A G T C G C T A A T G C A G C T A G T C A C G T A T G C A T C G
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.746
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 12.1bp
Average Position of motif in Background37.8 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGAGTGSCACCGKC
NNNACCGAGAGTNNN------
 A C G T A C G T A C G T A C G T A C G T A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGAGTGSCACCGKC
GNNACCGAGAATNNN------
 A C G T A C G T A C G T A C G T A C G T A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGAGAGTGSCACCGKC-
--AAGGKGRCGCAGGCA
 A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C A C G T
A C G T A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CGAGAGTGSCACCGKC
TTGACCGAGAATTCC------
 A C G T A C G T A C G T A C G T A C G T A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CGAGAGTGSCACCGKC---
----ANTGCCTGAGGCAAN
 A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGAGAGTGSCACCGKC
CCAGACAG--------
 A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CGAGAGTGSCACCGKC
TGCGGAGTGGGACTGG-
 A C G T A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CGAGAGTGSCACCGKC
CTTGAGTGGCT-----
 A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CGAGAGTGSCACCGKC
CCAGACRSVB------
 A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CGAGAGTGSCACCGKC
---GGGCGGGACC---
 A T G C A T C G C G T A A C T G C T G A A T C G C G A T A C T G A T C G T A G C C T G A A T G C A T G C A C T G A C G T A T G C
A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T