Information for 8-HAGTAATACT (Motif 11)

G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T C G T A C G A T A C G T C G T A A G T C A C G T C A G T
p-value:1e-5
log p-value:-1.318e+01
Information Content per bp:1.894
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.2 +/- 26.8bp
Average Position of motif in Background38.3 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:HAGTAATACT-
---TAATCCCN
 G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--HAGTAATACT
NTAATTAATAT-
 A C G T A C G T G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----HAGTAATACT
TCTTTANTAATANN
 A C G T A C G T A C G T A C G T G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---HAGTAATACT----
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0129.1_Otx1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---HAGTAATACT----
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:HAGTAATACT
--YTAATCCY
 G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

Pitx1/MA0682.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:HAGTAATACT
--TTAATCCC
 G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

MF0010.1_Homeobox_class/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:HAGTAATACT
-AATAATT--
 G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:HAGTAATACT
--TTAATCCT
 G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T
A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----HAGTAATACT-
GACNTCATTAATAANN
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G C T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T